Len_g02200


Description : not classified & original description: none


Gene families : OG0001678 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001678_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02200
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G16880 No alias uridylyltransferase-related 0.12 OrthoFinder output from all 47 species
Adi_g007402 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g08768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04149 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g20157 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g13835 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09514 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene22381.t1 Aspi01Gene22381 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055869 No alias not classified & original description: CDS=287-1060 0.03 OrthoFinder output from all 47 species
Cba_g15810 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.01G055000.1 Ceric.01G055000 not classified & original description: pacid=50590790... 0.13 OrthoFinder output from all 47 species
Ceric.1Z306900.1 Ceric.1Z306900 not classified & original description: pacid=50565854... 0.06 OrthoFinder output from all 47 species
Cre01.g061077 No alias ACT domain-containing protein ACR12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g08439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00676 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dde_g21092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04526 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016110001 No alias ACT domain-containing protein ACR11 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
LOC_Os08g14440.1 LOC_Os08g14440 ACT domain-containing protein DS12, chloroplastic... 0.08 OrthoFinder output from all 47 species
Lfl_g01045 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10429170g0010 No alias ACT domain-containing protein ACR11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_853979g0010 No alias ACT domain-containing protein ACR11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp7g00560.1 No alias ACT domain-containing protein ACR12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g30141 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g03938 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g17381 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g11634 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g53817 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g18286 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g20386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008572 No alias not classified & original description: CDS=1-756 0.03 OrthoFinder output from all 47 species
Sam_g16409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g117890.3.1 Solyc03g117890 ACT domain-containing protein ACR11 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Solyc06g068670.3.1 Solyc06g068670 ACT domain-containing protein ACR11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g00338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g01516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13948 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!