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  5. Len_g01276

Len_g01276


Description : not classified & original description: none


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01276

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00139910 evm_27.TU.AmTr_v1... VAN3-binding protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G63300 FKD1 FORKED 1 0.03 OrthoFinder output from all 47 species
Ala_g06549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07023 FKD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15909.t1 Aspi01Gene15909 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17726.t1 Aspi01Gene17726 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0028.g023814 No alias not classified & original description: CDS=173-1201 0.04 OrthoFinder output from all 47 species
Dac_g12672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001202001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g20147 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_90368g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g19042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo268691 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo269293 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g12100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR013666 PH_pln 377 480
IPR008546 VAN3-bd-like_auxin_canal 59 345
No external refs found!