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  5. Len_g01266

Len_g01266


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0002535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01266
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT4G29360 No alias O-Glycosyl hydrolases family 17 protein 0.04 OrthoFinder output from all 47 species
Ala_g27614 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11891 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04338 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene38106.t1 Aspi01Gene38106 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G053700.1 Ceric.15G053700 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g37077 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40044 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015282001 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g16381 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_51690g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ppi_g01042 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011980 No alias EC_3.2 glycosylase & original description: CDS=1-1419 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014084 No alias EC_3.2 glycosylase & original description: CDS=1-1821 0.02 OrthoFinder output from all 47 species
Sam_g29581 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49364 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g008580.2.1 Solyc12g008580 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g51982 No alias EC_3.2 glycosylase & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g12160 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e019867_P001 Zm00001e019867 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 31 348
IPR012946 X8 366 438
No external refs found!