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  5. Len_g00500

Len_g00500 (GGPS1)


Aliases : GGPS1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & original description: none


Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g00500
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT3G29430 No alias Terpenoid synthases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G36810 GGPS1 geranylgeranyl pyrophosphate synthase 1 0.02 OrthoFinder output from all 47 species
Cre12.g484200 GGPS1 Secondary metabolism.terpenoids.methylerythritol... 0.01 OrthoFinder output from all 47 species
Dcu_g09173 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dde_g10068 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Gb_26834 GGR regulatory subunit of geranyl diphosphate synthase... 0.04 OrthoFinder output from all 47 species
Lfl_g01814 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Mp2g13280.1 GGPS1 isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Spa_g07274 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Spa_g30144 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Tin_g01860 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Tin_g31498 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 107 352
No external refs found!