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  5. Len_g00355

Len_g00355 (PRA1.B5)


Aliases : PRA1.B5

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g00355
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G40380 PRA1.B2 prenylated RAB acceptor 1.B2 0.04 OrthoFinder output from all 47 species
Ala_g17771 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52368 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09824 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_38741 PRA1.B1 B-G-class Rab-GDF protein 0.05 OrthoFinder output from all 47 species
LOC_Os03g53070.1 PRA1.E, LOC_Os03g53070 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Lfl_g12734 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10850 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014691 PRA1.B2 B-G-class Rab-GDF protein & original description: CDS=1-618 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017592 PRA1.B3 B-G-class Rab-GDF protein & original description: CDS=1-558 0.05 OrthoFinder output from all 47 species
Spa_g40186 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e019411_P001 PRA1.B2, Zm00001e019411 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Zm00001e023951_P001 PRA1.B2, Zm00001e023951 B-G-class Rab-GDF protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 41 180
No external refs found!