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  5. Nbi_g45102

Nbi_g45102


Description : not classified & original description: none


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g45102

Target Alias Description ECC score Gene Family Method Actions
AT2G37390 NAKR2 Chloroplast-targeted copper chaperone protein 0.02 OrthoFinder output from all 47 species
AT3G24450 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g16354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53126.t1 Aspi01Gene53126 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53126.t2 Aspi01Gene53126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G005700.1 Ceric.32G005700 not classified & original description: pacid=50598369... 0.03 OrthoFinder output from all 47 species
Dac_g15229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019700001 No alias Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.03 OrthoFinder output from all 47 species
Gb_20921 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os03g60480.1 NAKR2, LOC_Os03g60480 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g40685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g01740.1 ATX1, ATATX1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g10650.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g26500.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04564 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17167 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g111600.3.1 HIPP26, FP6,... Heavy metal-associated isoprenylated plant protein 26... 0.02 OrthoFinder output from all 47 species
Solyc07g055010.3.1 Solyc07g055010 Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 33 86
No external refs found!