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  5. Nbi_g42697

Nbi_g42697


Description : not classified & original description: none


Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42697

Target Alias Description ECC score Gene Family Method Actions
Ala_g20978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g29123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 11 104
IPR002182 NB-ARC 205 410
No external refs found!