Nbi_g42472 (ATRPS13A, RPS13, PFL2, RPS13A)


Aliases : ATRPS13A, RPS13, PFL2, RPS13A

Description : component *(uS15) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0003364 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42472
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Aob_g34080 No alias component *(uS15) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Dcu_g34350 No alias component *(uS15) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Len_g34436 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000589 Ribosomal_S15 74 146
IPR012606 Ribosomal_S13/S15_N 1 60
No external refs found!