Nbi_g41732


Description : not classified & original description: none


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g41732

Target Alias Description ECC score Gene Family Method Actions
AT5G02390 No alias Protein of unknown function (DUF3741) 0.03 OrthoFinder output from all 47 species
Aev_g21406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31776 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13636 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28399.t1 Aspi01Gene28399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07034 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g01996 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g03091 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g47055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_9297837g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g18360.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g16334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008010 No alias not classified & original description: CDS=1-366 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022429 No alias not classified & original description: CDS=62-3433 0.04 OrthoFinder output from all 47 species
Sam_g09091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55806 LNG1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55838 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10611 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g12819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR032795 DUF3741-assoc 138 159
IPR025486 DUF4378 893 1058
IPR022212 DUF3741 260 287
No external refs found!