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  5. Nbi_g41048

Nbi_g41048


Description : AHL clade-A transcription factor & original description: none


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g41048

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00025000 AHL22,... AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00093420 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
AT4G35390 AGF1 AT-hook protein of GA feedback 1 0.03 OrthoFinder output from all 47 species
Ala_g15839 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33355 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18006.t1 HSP93-V, DCA1,... AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene65274.t1 AHL22, Aspi01Gene65274 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65278.t1 AHL22, Aspi01Gene65278 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04471 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g25020.1 LOC_Os02g25020 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Msp_g28100 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29316 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39566 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g30154 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12074 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g38879 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g007560.3.1 AHL22, Solyc08g007560 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Solyc08g077010.1.1 Solyc08g077010 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Solyc11g006090.3.1 AHL20, Solyc11g006090 AT-hook motif nuclear-localized protein 19... 0.03 OrthoFinder output from all 47 species
Zm00001e007105_P001 Zm00001e007105 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Zm00001e023375_P001 AHL22, Zm00001e023375 AT-hook motif nuclear-localized protein 25... 0.03 OrthoFinder output from all 47 species
Zm00001e040207_P002 Zm00001e040207 AT-hook motif nuclear-localized protein 21... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 98 210
No external refs found!