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Aliases : RAB, RBE
Description : C2H2 subclass ZFP transcription factor & original description: none
Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g40971 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00212840 | ZFP4,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00086480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00124p00105750 | KNU,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00149p00097070 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68360 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G53820 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G43540 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069225 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11899 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g33065 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g04120.1 | LOC_Os01g04120 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g32920.1 | LOC_Os01g32920 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g10470.1 | ZFP8, LOC_Os06g10470 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g23450.1 | LOC_Os07g23450 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g40300.1 | ZFP7, LOC_Os07g40300 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g27320.1 | ZFP8, LOC_Os09g27320 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g38610.1 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_357706g0010 | ZFP10, ATZFP10 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10324 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g36746 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g22987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g38006 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47303 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59122 | ZFP5 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g009170.3.1 | Solyc05g009170 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g009180.1.1 | Solyc05g009180 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41345 | SUP, FLO10, FON1 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g38082 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e017009_P001 | Zm00001e017009 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036816_P001 | ZFP6, Zm00001e036816 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
| BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
| BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
| BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
| BP | GO:0006541 | glutamine metabolic process | IEP | HCCA |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008061 | chitin binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |