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  5. Nbi_g38342

Nbi_g38342


Description : not classified & original description: none


Gene families : OG0001967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38342

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0038.g026357 COP3, UNS2, HLS1 not classified & original description: CDS=1-1248 0.03 OrthoFinder output from all 47 species
LOC_Os02g08400.1 COP3, UNS2,... Probable N-acetyltransferase HLS1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021205 COP3, UNS2, HLS1 not classified & original description: CDS=732-1952 0.03 OrthoFinder output from all 47 species
Smo104443 COP3, UNS2, HLS1 Probable N-acetyltransferase HLS1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000182 GNAT_dom 138 196
No external refs found!