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  5. Nbi_g36791

Nbi_g36791 (PRF5)


Aliases : PRF5

Description : profilin actin nucleation protein & original description: none


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g36791
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Aev_g01728 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g41171 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16087 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g48365 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27568 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g26209 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27569 PRF5 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12184 No alias profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g044630.2.1 PRF4, Solyc12g044630 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species
Spa_g36566 PRF5 profilin actin nucleation protein & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g33126 PFN3, PRF3 profilin acTin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006836 neurotransmitter transport IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 1 126
No external refs found!