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Description : not classified & original description: none
Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00020910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G30825 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016371 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g01555 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01078 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14519 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g07385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21865 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene12777.t1 | Aspi01Gene12777 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12627 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G031400.1 | Ceric.16G031400 | not classified & original description: pacid=50589889... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06462 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g20213 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g25550.1 | LOC_Os09g25550 | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_187850g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g58424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012097 | No alias | not classified & original description: CDS=661-1995 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0063.g015623 | No alias | not classified & original description: CDS=1-2238 | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23344 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033443 | PPR_long | 425 | 596 |
| IPR002885 | Pentatricopeptide_repeat | 944 | 990 |
| IPR002885 | Pentatricopeptide_repeat | 861 | 922 |
| IPR002885 | Pentatricopeptide_repeat | 807 | 837 |
| IPR002885 | Pentatricopeptide_repeat | 634 | 661 |
| IPR002885 | Pentatricopeptide_repeat | 599 | 623 |
| IPR002885 | Pentatricopeptide_repeat | 703 | 728 |
| No external refs found! |