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  5. Nbi_g34997

Nbi_g34997 (SDF2, AtSDF2, ATSDL)


Aliases : SDF2, AtSDF2, ATSDL

Description : component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex & original description: none


Gene families : OG0002033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34997
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00177470 SDF2, AtSDF2,... Stromal cell-derived factor 2-like protein... 0.02 OrthoFinder output from all 47 species
AT2G25110 SDF2, AtSDF2, ATSDL stromal cell-derived factor 2-like protein precursor 0.18 OrthoFinder output from all 47 species
Aspi01Gene08025.t1 SDF2, AtSDF2,... component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0100.g044339 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.14 SDF2, AtSDF2, ATSDL Stromal cell-derived factor 2-like protein... 0.05 OrthoFinder output from all 47 species
Cre13.g571750 SDF2, AtSDF2, ATSDL Stromal cell-derived factor 2-like protein... 0.08 OrthoFinder output from all 47 species
Dcu_g21401 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.04 OrthoFinder output from all 47 species
LOC_Os08g17680.1 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.05 OrthoFinder output from all 47 species
LOC_Os08g34190.1 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.18 OrthoFinder output from all 47 species
Mp7g08270.1 SDF2, AtSDF2, ATSDL component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.06 OrthoFinder output from all 47 species
Smo271847 SDF2, AtSDF2, ATSDL Stromal cell-derived factor 2-like protein... 0.04 OrthoFinder output from all 47 species
Solyc03g117020.4.1 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.08 OrthoFinder output from all 47 species
Spa_g52416 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.14 OrthoFinder output from all 47 species
Zm00001e022473_P002 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016093 MIR_motif 144 290
No external refs found!