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  5. Nbi_g34923

Nbi_g34923


Description : not classified & original description: none


Gene families : OG0000971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000971_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34923
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Als_g04027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g65182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24977 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28008 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g38607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40498 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g27892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31590 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g20895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21426 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25381 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g26366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35432 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35595 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24858 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g02018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47016 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g49542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g61004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63256 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65338 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 192 208
No external refs found!