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  5. Nbi_g34365

Nbi_g34365 (PEN3, ABCG36, ATPDR8,...)


Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34365

Target Alias Description ECC score Gene Family Method Actions
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.02 OrthoFinder output from all 47 species
Adi_g035578 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29224 ATPDR7, PDR7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03117 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06778 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06793 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16447 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28061.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G052500.1 PEN3, ABCG36,... subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g37574 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22022 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034746001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_37007 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_41755 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g42350.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g11760.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os08g29570.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os09g16449.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g14205 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17304 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22919 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10465 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15527 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021403 ABCG40, PDR12,... subfamily ABCG transporter & original description: CDS=3744-5723 0.03 OrthoFinder output from all 47 species
Sam_g13017 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52599 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo118688 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo429390 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo96758 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc05g053610.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g06968 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21976 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51757 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12264 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27149 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016714_P002 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e027849_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e033689_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1188 1400
IPR013525 ABC_2_trans 509 721
IPR029481 ABC_trans_N 100 149
IPR003439 ABC_transporter-like_ATP-bd 891 1042
IPR043926 ABCG_dom 389 441
IPR013581 PDR_assoc 726 788
IPR003439 ABC_transporter-like_ATP-bd 174 356
No external refs found!