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AT5G56980


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0002125 (Gene family) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G56980
Cluster HCCA cluster: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g46340 Os05g0540900 No description available 0.02 Gene family
Solyc03g116510.1.1 Solyc03g116510.1 No description available 0.02 Gene family
Solyc05g018820.1.1 Solyc05g018820.1 35.2 not assigned.unknown unknown protein 0.02 Gene family
Zm00001d032287 No alias No description available 0.06 Gene family
Zm00001d038860 GRMZM5G847982 No description available 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025520 DUF4408 5 33
IPR008480 DUF761_pln 343 377
No external refs found!