Nbi_g32016


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g32016

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50814 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16794 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24180 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.06 OrthoFinder output from all 47 species
Azfi_s0119.g046677 CRR2 not classified & original description: CDS=1-1557 0.05 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.03 OrthoFinder output from all 47 species
Cba_g29874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67470 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67900 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g72718 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.03 OrthoFinder output from all 47 species
Ceric.27G000800.1 Ceric.27G000800 not classified & original description: pacid=50605275... 0.04 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21425 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g04286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06612 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06754 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g13218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15529 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g17698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26547 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g36360 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.04 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g38083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Msp_g07853 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41204 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17818 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20192 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21177 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29304 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16479 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57507 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32232 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55770 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008098 CRR22 not classified & original description: CDS=1-2784 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010805 VAC1, ECB2, ATECB2 not classified & original description: CDS=294-2756 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013713 EMB2758 not classified & original description: CDS=1-1941 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013942 No alias not classified & original description: CDS=1-3669 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014379 CRR22 not classified & original description: CDS=1-2430 0.03 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g07054 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09894 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14288 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g17686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17746 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23085 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 69 116
IPR002885 Pentatricopeptide_repeat 171 218
No external refs found!