AT5G27470


Description : seryl-tRNA synthetase / serine--tRNA ligase


Gene families : OG_01_0004312 (Gene family) Phylogenetic Tree(s): OG0004312_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G27470
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Cre03.g189400 No alias 29.1.11 protein.aa activation.serine-tRNA ligase... 0.03 Gene family
Solyc01g098870.3.1 Solyc01g098870.3 29.1.11 protein.aa activation.serine-tRNA ligase... 0.03 Gene family
Zm00001d048174 No alias 29.1.11 protein.aa activation.serine-tRNA ligase... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0004828 serine-tRNA ligase activity ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005829 cytosol ISS Arabidopsis.org
BP GO:0006094 gluconeogenesis RCA Arabidopsis.org
BP GO:0006096 glycolytic process RCA Arabidopsis.org
BP GO:0006434 seryl-tRNA aminoacylation ISS Arabidopsis.org
BP GO:0006499 N-terminal protein myristoylation RCA Arabidopsis.org
BP GO:0009165 nucleotide biosynthetic process RCA Arabidopsis.org
BP GO:0009651 response to salt stress RCA Arabidopsis.org
BP GO:0046686 response to cadmium ion IEP Arabidopsis.org
BP GO:0046686 response to cadmium ion RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015866 Ser-tRNA-synth_1_N 1 112
IPR002314 aa-tRNA-synt_IIb 224 411
No external refs found!