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  5. Nbi_g31677

Nbi_g31677 (PSBW)


Aliases : PSBW

Description : component *(PsbW) of PS-II complex & original description: none


Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g31677

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266120 PSBW,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
AT2G30570 PSBW photosystem II reaction center W 0.04 OrthoFinder output from all 47 species
Aev_g47226 MAC3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04986 No alias component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10204 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12837 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56334 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32667 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30138 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45376.t1 PSBW, Aspi01Gene45376 component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G066400.1 PSBW, Ceric.32G066400 component *(PsbW) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Dac_g08641 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18523 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g20782 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01886 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04368 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000743001 PSBW Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
LOC_Os01g56680.2 PSBW, LOC_Os01g56680 component PsbW of PS-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os05g43310.1 PSBW, LOC_Os05g43310 component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species
Mp5g14190.1 PSBW component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species
Msp_g20236 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20237 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23251 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06296 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_6770V3.1 PSBW, Pp3c18_6770 photosystem II reaction center W 0.02 OrthoFinder output from all 47 species
Pp3c22_16330V3.1 PSBW, Pp3c22_16330 photosystem II reaction center W 0.02 OrthoFinder output from all 47 species
Ppi_g11136 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019755 PSBW component *(PsbW) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g39267 No alias component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g084050.4.1 PSBW, Solyc06g084050 component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species
Spa_g01488 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24382 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24383 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027386_P002 PSBW, Zm00001e027386 component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 10 114
No external refs found!