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  5. Nbi_g30819

Nbi_g30819


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: none


Gene families : OG0007625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007625_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30819

Target Alias Description ECC score Gene Family Method Actions
Aob_g20717 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Aop_g05778 No alias regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
Aop_g11118 No alias regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Aspi01Gene56585.t1 Aspi01Gene56585 regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Azfi_s0791.g087244 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Ceric.02G027600.1 Ceric.02G027600 regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Dcu_g12553 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Msp_g14974 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021869 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Spa_g50473 No alias regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
Tin_g02127 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 785
No external refs found!