AT5G16280


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003808 (Gene family) Phylogenetic Tree(s): OG0003808_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G16280
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000767.25 No alias 35.2 not assigned.unknown Tetratricopeptide repeat... 0.02 Gene family
Cre01.g024400 No alias 35.2 not assigned.unknown Tetratricopeptide repeat... 0.01 Gene family
GSVIVT01022591001 No alias 35.2 not assigned.unknown Tetratricopeptide repeat... 0.18 Gene family
LOC_Os03g57300 Os03g0786900 35.2 not assigned.unknown Tetratricopeptide repeat... 0.02 Gene family
MA_10430644g0010 No alias 35.2 not assigned.unknown Tetratricopeptide repeat... 0.02 Gene family
MA_6550228g0010 No alias 35.2 not assigned.unknown Tetratricopeptide repeat... 0.02 Gene family
Smo113725 PACid_15418497 35.2 not assigned.unknown Tetratricopeptide repeat... 0.07 Gene family
Solyc01g006960.3.1 Solyc01g006960.3 35.2 not assigned.unknown Tetratricopeptide repeat... 0.2 Gene family
Zm00001d034364 GRMZM2G116126 35.2 not assigned.unknown Tetratricopeptide repeat... 0.17 Gene family

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Arabidopsis.org
BP GO:0016926 protein desumoylation RCA Arabidopsis.org
BP GO:0050665 hydrogen peroxide biosynthetic process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024420 TRAPP_III_complex_Trs85 185 513
No external refs found!