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  5. Nbi_g30528

Nbi_g30528 (CAB3, AB180, LHCB1.2)


Aliases : CAB3, AB180, LHCB1.2

Description : not classified & original description: none


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30528
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cba_g46805 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g28439 LHCB1.4, LHB1B1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36992 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g32553 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g58740 LHCB1.5, LHB1B2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 7 82
No external refs found!