Nbi_g30229


Description : not classified & original description: none


Gene families : OG0001105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30229
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Adi_g024088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02307.t1 Aspi01Gene02307 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36682.t1 Aspi01Gene36682 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36686.t1 Aspi01Gene36686 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01083 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g07712 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26108 YUC11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21643 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Mp2g16380.1 No alias no description available(sp|a0a0p0v5u9|yuc1_orysj : 114.0) 0.05 OrthoFinder output from all 47 species
Ppi_g17408 YUC11 flavin-dependent monooxygenase *(YUCCA) & original... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022671 No alias not classified & original description: CDS=1-1803 0.03 OrthoFinder output from all 47 species
Smo178716 No alias Probable indole-3-pyruvate monooxygenase YUCCA5... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!