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  5. Nbi_g30066

Nbi_g30066 (AMY1, ATAMY1)


Aliases : AMY1, ATAMY1

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30066

Target Alias Description ECC score Gene Family Method Actions
Adi_g021932 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06952 AMY2, ATAMY2 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00848 AMY2, ATAMY2 alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09925 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008273_P002 AMY2, ATAMY2,... alpha amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 203 493
IPR012850 A-amylase_bs_C 514 574
No external refs found!