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  5. Nbi_g29928

Nbi_g29928


Description : not classified & original description: none


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29928
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270180 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00010p00170400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00058750 evm_27.TU.AmTr_v1... Dynein 8 kDa light chain, flagellar outer arm... 0.04 OrthoFinder output from all 47 species
AT1G23220 No alias Dynein light chain type 1 family protein 0.04 OrthoFinder output from all 47 species
AT5G20110 No alias Dynein light chain type 1 family protein 0.05 OrthoFinder output from all 47 species
Aev_g07037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17184 No alias light chain of Dynein microtubule-based motor protein... 0.04 OrthoFinder output from all 47 species
Ala_g02908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09292 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g04623 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Als_g26571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g45425 No alias not classified & original description: none 0.33 OrthoFinder output from all 47 species
Aob_g11981 No alias light chain of Dynein microtubule-based motor protein... 0.06 OrthoFinder output from all 47 species
Aop_g06468 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Aop_g18477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67628 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14541.t1 Aspi01Gene14541 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32570.t1 Aspi01Gene32570 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40803.t1 Aspi01Gene40803 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46981.t1 Aspi01Gene46981 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70313.t1 Aspi01Gene70313 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0484.g073375 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Ceric.08G049300.1 Ceric.08G049300 not classified & original description: pacid=50637873... 0.05 OrthoFinder output from all 47 species
Ceric.31G072000.1 Ceric.31G072000 not classified & original description: pacid=50574422... 0.03 OrthoFinder output from all 47 species
Dac_g20049 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g32678 No alias light chain of Dynein microtubule-based motor protein... 0.01 OrthoFinder output from all 47 species
Dcu_g48500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47915 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g22084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014353001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01017066001 No alias Dynein 8 kDa light chain, flagellar outer arm... 0.06 OrthoFinder output from all 47 species
Gb_19477 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22193 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_23189 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g37490.1 LOC_Os01g37490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g55510.1 LOC_Os01g55510 Dynein 8 kDa light chain, flagellar outer arm... 0.01 OrthoFinder output from all 47 species
LOC_Os02g50020.1 LOC_Os02g50020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g23721 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g56367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_4203g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g05470.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g44978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63051 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017907 No alias light chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Spa_g07930 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g34772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015738_P001 Zm00001e015738 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 20 102
No external refs found!