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  5. Nbi_g29724

Nbi_g29724


Description : not classified & original description: none


Gene families : OG0003132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29724
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Adi_g123968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70302 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g70303 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.13G096900.1 Ceric.13G096900 not classified & original description: pacid=50636239... 0.03 OrthoFinder output from all 47 species
Dde_g47761 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g47869 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Len_g13229 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g58541 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g42321 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g29030 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13115 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Smo138860 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo230122 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo233866 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo410688 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo437311 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g48498 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g48534 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g46348 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR012951 BBE 671 710
IPR006094 Oxid_FAD_bind_N 229 372
No external refs found!