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  5. Nbi_g29697

Nbi_g29697


Description : RNA polymerase-IV-positioning factor *(SHH) & original description: none


Gene families : OG0001794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29697

Target Alias Description ECC score Gene Family Method Actions
Adi_g045431 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Ala_g01314 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13966 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012111 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 155 282
No external refs found!