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  5. Nbi_g28982

Nbi_g28982 (LHCB2.3, LHCB2, LHCB2.4)


Aliases : LHCB2.3, LHCB2, LHCB2.4

Description : component *(LHCb1/2/3) of LHC-II complex & original description: none


Gene families : OG0000031 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28982
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Aop_g14415 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Aop_g18115 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 39 species
Aop_g22172 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 39 species
Aspi01Gene66566.t1 LHCB2.2, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Dac_g23315 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Dde_g48076 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 39 species
MA_10431300g0020 LHCB2.2, LHCB2 component LHCb1/2/3 of LHC-II complex 0.05 OrthoFinder output from all 39 species
MA_131587g0010 LHCB1.4, LHB1B1 component LHCb1/2/3 of LHC-II complex 0.04 OrthoFinder output from all 39 species
Msp_g16714 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Msp_g25099 No alias component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 39 species
Msp_g37594 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Nbi_g30527 LHCB1.5, LHB1B2 not classified & original description: none 0.04 OrthoFinder output from all 39 species
Pir_g47176 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 39 species
Sam_g05850 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Sam_g26146 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Smo228506 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 39 species
Smo407444 LHCB3*1, LHCB3 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 39 species
Smo75552 LHCB2.3, LHCB2, LHCB2.4 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 97 263
No external refs found!