AT4G30220 (RUXF)


Aliases : RUXF

Description : small nuclear ribonucleoprotein F


Gene families : OG_01_0004580 (Gene family) Phylogenetic Tree(s): OG0004580_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G30220
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cre05.g241300 No alias 27.1 RNA.processing small nuclear ribonucleoprotein F (RUXF) 0.04 Gene family
GSVIVT01003994001 No alias 27.1 RNA.processing small nuclear ribonucleoprotein F (RUXF) 0.12 Gene family
LOC_Os11g43620 Os11g0657300 27.1 RNA.processing small nuclear ribonucleoprotein F (RUXF) 0.04 Gene family
MA_26016g0010 No alias 27.1 RNA.processing small nuclear ribonucleoprotein F (RUXF) 0.06 Gene family
Smo228181 PACid_15405444 27.1 RNA.processing small nuclear ribonucleoprotein F... 0.1 Gene family
Solyc10g081370.2.1 Solyc10g081370.2 27.1 RNA.processing small nuclear ribonucleoprotein F (RUXF) 0.13 Gene family
Zm00001d015460 GRMZM2G058252 27.1 RNA.processing small nuclear ribonucleoprotein F (RUXF) 0.05 Gene family
Zm00001d053754 GRMZM2G168252 27.1 RNA.processing small nuclear ribonucleoprotein F (RUXF) 0.06 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005732 small nucleolar ribonucleoprotein complex ISS Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 11 73
No external refs found!