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  5. Nbi_g27611

Nbi_g27611 (PSBQA, PSBQ-1, PSBQ)


Aliases : PSBQA, PSBQ-1, PSBQ

Description : component *(PsbQ) of PS-II oxygen-evolving center & original description: none


Gene families : OG0002352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g27611
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265990 PQL1, PQL2,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 OrthoFinder output from all 47 species
AMTR_s00029p00134700 PSBQ-2, PSII-Q,... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00098p00154060 PQL1, PQL2,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 OrthoFinder output from all 47 species
AMTR_s00098p00157610 PSBQ-2, PSII-Q,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
AT1G14150 PQL1, PQL2 PsbQ-like 2 0.03 OrthoFinder output from all 47 species
AT2G01918 PQL3 PsbQ-like 3 0.06 OrthoFinder output from all 47 species
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.06 OrthoFinder output from all 47 species
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.05 OrthoFinder output from all 47 species
Adi_g009979 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Adi_g043833 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Aev_g03692 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ala_g00903 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Als_g02853 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Als_g13839 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Aob_g26540 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Azfi_s0199.g057486 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Cba_g02399 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Cba_g63796 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Ceric.07G029100.1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Cre08.g372450 PSBQA, PSBQ-1, PSBQ Oxygen-evolving enhancer protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g01297 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Dcu_g03585 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Dcu_g41298 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Dde_g06282 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Ehy_g15147 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
GSVIVT01002809001 PSBQ-2, PSII-Q, PSBQ Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.07 OrthoFinder output from all 47 species
GSVIVT01019955001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 OrthoFinder output from all 47 species
Gb_04734 PSBQ-2, PSII-Q, PSBQ component PsbQ of PS-II oxygen-evolving center 0.04 OrthoFinder output from all 47 species
LOC_Os02g36850.1 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.02 OrthoFinder output from all 47 species
LOC_Os07g36080.1 PSBQA, PSBQ-1,... component PsbQ of PS-II oxygen-evolving center 0.04 OrthoFinder output from all 47 species
Len_g22517 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
MA_218996g0010 PSBQA, PSBQ-1, PSBQ component PsbQ of PS-II oxygen-evolving center 0.05 OrthoFinder output from all 47 species
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.05 OrthoFinder output from all 47 species
Msp_g48334 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ore_g21011 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ore_g34253 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Pnu_g12550 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Pp3c13_6570V3.1 PSBQA, PSBQ-1,... photosystem II subunit QA 0.01 OrthoFinder output from all 47 species
Sam_g14072 No alias component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Smo106248 PSBQ-2, PSII-Q, PSBQ Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
Solyc02g079950.3.1 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.05 OrthoFinder output from all 47 species
Spa_g21161 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Spa_g56049 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Tin_g19213 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Zm00001e010513_P001 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.04 OrthoFinder output from all 47 species
Zm00001e014918_P002 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 91 282
No external refs found!