Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G25270
Cluster HCCA cluster: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
MA_10436764g0010 No alias No description available 0.01 Gene family
MA_112849g0010 No alias No description available 0.02 Gene family
MA_20599g0020 No alias 35.1.5 not ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo84339 PACid_15416290 35.1.5 not ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc01g095690.2.1 Solyc01g095690.2 No description available 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IMP
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 379 438
IPR002885 Pentatricopeptide_repeat 161 205
IPR002885 Pentatricopeptide_repeat 259 303
IPR002885 Pentatricopeptide_repeat 233 256
IPR002885 Pentatricopeptide_repeat 332 357
IPR002885 Pentatricopeptide_repeat 133 156
IPR002885 Pentatricopeptide_repeat 500 525
No external refs found!