AT4G24820


Description : 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain


Gene families : OG_01_0005491 (Gene family) Phylogenetic Tree(s): OG0005491_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G24820
Cluster HCCA cluster: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000615.75 No alias No description available 0.09 Gene family
Cre13.g581450 No alias No description available 0.15 Gene family
GSVIVT01007538001 No alias No description available 0.03 Gene family
LOC_Os04g40850 Os04g0485000 No description available 0.06 Gene family
MA_10428103g0010 No alias No description available 0.03 Gene family
Smo146093 PACid_15421254 No description available 0.04 Gene family
Solyc07g009140.3.1 Solyc07g009140.3 No description available 0.1 Gene family
Zm00001d003257 GRMZM2G093557 No description available 0.09 Gene family
Zm00001d017117 GRMZM2G029583 No description available 0.09 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Arabidopsis.org
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005634 nucleus TAS Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Arabidopsis.org
BP GO:0006635 fatty acid beta-oxidation RCA Arabidopsis.org
BP GO:0006888 ER to Golgi vesicle-mediated transport RCA Arabidopsis.org
CC GO:0008541 proteasome regulatory particle, lid subcomplex ISS Arabidopsis.org
BP GO:0009407 toxin catabolic process RCA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0009735 response to cytokinin RCA Arabidopsis.org
BP GO:0010090 trichome morphogenesis RCA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0030163 protein catabolic process TAS Arabidopsis.org
BP GO:0042023 DNA endoreduplication RCA Arabidopsis.org
BP GO:0043090 amino acid import RCA Arabidopsis.org
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0043248 proteasome assembly RCA Arabidopsis.org
BP GO:0048767 root hair elongation RCA Arabidopsis.org
BP GO:0051302 regulation of cell division RCA Arabidopsis.org
BP GO:0051510 regulation of unidimensional cell growth RCA Arabidopsis.org
BP GO:0051604 protein maturation RCA Arabidopsis.org
BP GO:0051788 response to misfolded protein RCA Arabidopsis.org
BP GO:0080129 proteasome core complex assembly RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019585 Rpn7/CSN1 64 237
IPR000717 PCI_dom 255 355
No external refs found!