AT4G12050


Description : Predicted AT-hook DNA-binding family protein


Gene families : OG_01_0000442 (Gene family) Phylogenetic Tree(s): OG0000442_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G12050
Cluster HCCA cluster: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013202001 No alias 35.1.7 not assigned.no ontology.AT hook motif-containing... 0.03 Gene family
GSVIVT01016497001 No alias 17.6.3 hormone... 0.03 Gene family
LOC_Os02g25020 Os02g0448000 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
LOC_Os04g50030 Os04g0590200 35.1.7 not assigned.no ontology.AT hook motif-containing... 0.03 Gene family
LOC_Os06g04540 Os06g0136900 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
LOC_Os08g44910 Os08g0563200 35.1.7 not assigned.no ontology.AT hook motif-containing... 0.02 Gene family
Smo404546 PACid_15411012 35.1.7 not assigned.no ontology.AT hook motif-containing... 0.02 Gene family
Solyc01g091470.3.1 Solyc01g091470.3 28.99 DNA.unspecified Encodes a nuclear localized AT... 0.02 Gene family
Solyc06g060500.1.1 Solyc06g060500.1 27.3.67 RNA.regulation of transcription.putative... 0.06 Gene family
Solyc07g056300.1.1 Solyc07g056300.1 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Solyc08g007560.2.1 Solyc08g007560.2 28.99 DNA.unspecified Encodes a nuclear localized AT... 0.13 Gene family
Solyc08g077010.1.1 Solyc08g077010.1 35.1.7 not assigned.no ontology.AT hook motif-containing... 0.02 Gene family
Solyc08g079720.3.1 Solyc08g079720.3 28.99 DNA.unspecified Encodes a nuclear localized AT... 0.05 Gene family
Zm00001d002495 GRMZM2G300111 35.1.7 not assigned.no ontology.AT hook motif-containing... 0.03 Gene family
Zm00001d026035 GRMZM2G086541 35.1.7 not assigned.no ontology.AT hook motif-containing... 0.03 Gene family
Zm00001d053429 GRMZM2G035077 27.3.67 RNA.regulation of transcription.putative... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005175 PPC_dom 146 260
No external refs found!