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  5. Nbi_g25979

Nbi_g25979


Description : regulatory protein *(ISTL) of ESCRT-mediated sorting & original description: none


Gene families : OG0000406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25979
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00200p00021070 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT4G29440 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 OrthoFinder output from all 47 species
Aev_g43259 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Aop_g57755 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.13 OrthoFinder output from all 47 species
Ceric.03G049300.1 Ceric.03G049300 regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.28 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g00818 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.09 OrthoFinder output from all 47 species
Ehy_g20250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14681 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g37510.1 LOC_Os09g37510 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_142027g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp3g09120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g18214 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.09 OrthoFinder output from all 47 species
Sam_g29854 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.07 OrthoFinder output from all 47 species
Smo91777 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc02g083130.4.1 Solyc02g083130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g02725 No alias regulatory protein *(ISTL) of ESCRT-mediated sorTing &... 0.03 OrthoFinder output from all 47 species
Zm00001e034943_P001 Zm00001e034943 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005061 Ist1 75 238
No external refs found!