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  5. Nbi_g25568

Nbi_g25568


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25568

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g60140.1 LOC_Os03g60140 U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g15692 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024927 No alias E3 ubiquitin ligase & original description: CDS=350-1696 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!