1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g25320

Nbi_g25320


Description : not classified & original description: none


Gene families : OG0001733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001733_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25320
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Ala_g21086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09828 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g50633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40284.t2 Aspi01Gene40284 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51520.t1 Aspi01Gene51520 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06711 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g17404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009438001 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
Gb_06730 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_23490 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g02266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_394035g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Ppi_g13057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63857 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002893 No alias not classified & original description: CDS=719-2329 0.03 OrthoFinder output from all 47 species
Sam_g25625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 75 177
IPR025610 MYC/MYB_N 11 68
No external refs found!