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  5. Nbi_g24908

Nbi_g24908


Description : not classified & original description: none


Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24908
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Ala_g27027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g48708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22951.t1 Aspi01Gene22951 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35058.t2 Aspi01Gene35058 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00842 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g24298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g41813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!