Nbi_g24651


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24651
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00187000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33760... 0.05 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004703 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g005224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g005661 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007782 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020425 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071893 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18317 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g43288 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05283 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g19069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39732 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g21675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28224 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g04126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13985 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16175 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g21153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23572 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28518 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28526 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g68104 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70728 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene52031.t1 Aspi01Gene52031 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.08 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.09 OrthoFinder output from all 47 species
Cba_g07225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15829 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35085 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g67652 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72789 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.15G021100.1 Ceric.15G021100 not classified & original description: pacid=50639951... 0.04 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.07 OrthoFinder output from all 47 species
Dac_g13270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30446 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35851 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05769 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g07044 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g48863 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20585 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g01322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18855 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g18986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19013 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56529 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g57360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_812716g0010 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15551 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17498 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g34481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41385 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04305 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g24066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38813 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01896 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g37891 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03470 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g53557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55534 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09427 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g12223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14580 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g16587 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23958 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52133 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03804 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13689 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g15029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19174 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21831 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g30136 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35666 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41605 OTP81 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g44063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g46233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 367 413
IPR002885 Pentatricopeptide_repeat 469 515
IPR002885 Pentatricopeptide_repeat 571 618
IPR002885 Pentatricopeptide_repeat 264 311
IPR002885 Pentatricopeptide_repeat 165 191
IPR002885 Pentatricopeptide_repeat 441 468
No external refs found!