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  5. Nbi_g24259

Nbi_g24259


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g24259
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00125480 KAN2,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G69580 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g023512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g08301 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04353 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g06318 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g38602 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65261.t1 Aspi01Gene65261 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0089.g042590 No alias not classified & original description: CDS=1-831 0.04 OrthoFinder output from all 47 species
Azfi_s0121.g046895 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.02G023400.1 Ceric.02G023400 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G030100.1 Ceric.07G030100 transcription factor *(CLAUSA) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G027900.1 Ceric.21G027900 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G076700.1 Ceric.21G076700 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05684 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g23417 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03380 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g32284 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026319001 KAN, KAN1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_08427 KAN, KAN1 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os08g33750.1 LOC_Os08g33750 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Len_g06559 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g59713 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06174 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_138039g0010 KAN2 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g00386 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g17637 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11277 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g12151 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g08186 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10280 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g09465 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g15241 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g18907 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19047 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g27536 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g46631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo438636 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc02g080740.3.1 Solyc02g080740 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc03g006150.2.1 Solyc03g006150 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Spa_g05501 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g24824 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g16470 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e007231_P002 Zm00001e007231 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Zm00001e013199_P003 Zm00001e013199 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e027318_P001 Zm00001e027318 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e039024_P001 Zm00001e039024 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 105 150
No external refs found!