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  5. Nbi_g23746

Nbi_g23746


Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g23746

Target Alias Description ECC score Gene Family Method Actions
Cba_g03839 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00980 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033611001 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Msp_g11858 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019786 No alias EC_4.3 carbon-nitrogen lyase & original description: CDS=682-2073 0.03 OrthoFinder output from all 47 species
Tin_g03242 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 187 273
No external refs found!