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  5. Nbi_g21358

Nbi_g21358


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21358

Target Alias Description ECC score Gene Family Method Actions
Aev_g27991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19052 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61086 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34731.t1 Aspi01Gene34731 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29359 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.05 OrthoFinder output from all 47 species
Ceric.13G052000.1 Ceric.13G052000 not classified & original description: pacid=50635571... 0.04 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.04 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.05 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.04 OrthoFinder output from all 47 species
Ceric.39G007300.1 Ceric.39G007300 not classified & original description: pacid=50582343... 0.05 OrthoFinder output from all 47 species
Dac_g05194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29241 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01021403001 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.05 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g27027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30107 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30780 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g34591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53186 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019330 No alias not classified & original description: CDS=1-2295 0.04 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20961 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 510 533
IPR002885 Pentatricopeptide_repeat 741 771
IPR002885 Pentatricopeptide_repeat 539 562
IPR002885 Pentatricopeptide_repeat 137 163
IPR002885 Pentatricopeptide_repeat 108 131
IPR002885 Pentatricopeptide_repeat 337 366
IPR002885 Pentatricopeptide_repeat 637 685
IPR002885 Pentatricopeptide_repeat 435 482
IPR002885 Pentatricopeptide_repeat 234 281
No external refs found!