AT3G16170


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_01_0006949 (Gene family) Phylogenetic Tree(s): OG0006949_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G16170
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017056001 No alias 11.1.8 lipid metabolism.FA synthesis and FA... 0.02 Gene family
Solyc12g044300.2.1 Solyc12g044300.2 11.1.8 lipid metabolism.FA synthesis and FA... 0.12 Gene family
Zm00001d043376 GRMZM2G460078 11.1.8 lipid metabolism.FA synthesis and FA... 0.08 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
MF GO:0016208 AMP binding ISS Arabidopsis.org
MF GO:0090409 malonyl-CoA synthetase activity IDA Arabidopsis.org
BP GO:0090410 malonate catabolic process IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025110 AMP-bd_C 445 530
IPR000873 AMP-dep_Synth/Lig 11 435
No external refs found!