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  5. Nbi_g21214

Nbi_g21214 (TUA6)


Aliases : TUA6

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00112490 TOR2, TUA4,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.03 OrthoFinder output from all 47 species
AT5G19780 TUA5 tubulin alpha-5 0.03 OrthoFinder output from all 47 species
Als_g10639 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aob_g07816 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g04158 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g62975 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g012907 TUA3 not classified & original description: CDS=210-746 0.04 OrthoFinder output from all 47 species
Azfi_s2520.g112004 TOR2, TUA4 not classified & original description: CDS=1-861 0.05 OrthoFinder output from all 47 species
GSVIVT01009258001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
LOC_Os11g14220.1 TUA6, LOC_Os11g14220 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Len_g18852 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Mp1g24530.1 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp8g12620.1 TUA6 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Pnu_g01242 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pnu_g10754 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g09431 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sam_g16660 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo236391 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc08g006890.3.1 TUA6, Solyc08g006890 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 302 355
IPR003008 Tubulin_FtsZ_GTPase 42 252
No external refs found!