AT3G14730


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G14730
Cluster HCCA cluster: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Gene family
AT3G26540 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
GSVIVT01017365001 No alias No description available 0.02 Gene family
GSVIVT01037258001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os04g41120 Os04g0488200 No description available 0.06 Gene family
Solyc03g098420.3.1 Solyc03g098420.3 No description available 0.02 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.02 Gene family
Solyc09g009950.3.1 Solyc09g009950.3 No description available 0.02 Gene family
Zm00001d036833 GRMZM5G811022 No description available 0.04 Gene family
Zm00001d043081 GRMZM2G350410 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 125 170
IPR002885 Pentatricopeptide_repeat 431 479
IPR002885 Pentatricopeptide_repeat 100 119
IPR002885 Pentatricopeptide_repeat 300 327
IPR002885 Pentatricopeptide_repeat 228 258
IPR002885 Pentatricopeptide_repeat 573 600
No external refs found!