Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0000772 (Gene family) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G13150
Cluster HCCA cluster: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g42210 Os02g0633200 35.1.5 not ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc02g062910.2.1 Solyc02g062910.2 35.1.5 not ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc03g031460.1.1 Solyc03g031460.1 35.1.5 not ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d012606 GRMZM2G139141 35.1.5 not ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d017317 GRMZM2G165290 35.1.5 not ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 191 238
IPR002885 Pentatricopeptide_repeat 296 345
IPR002885 Pentatricopeptide_repeat 131 153
IPR002885 Pentatricopeptide_repeat 159 185
IPR002885 Pentatricopeptide_repeat 265 294
No external refs found!