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  5. Nbi_g19526

Nbi_g19526


Description : actin-cytoskeleton contact protein (NET3) of ER-cytoskeleton-PM interface & original description: none


Gene families : OG0001336 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19526

Target Alias Description ECC score Gene Family Method Actions
AT5G41790 CIP1 COP1-interactive protein 1 0.05 OrthoFinder output from all 47 species
Aob_g29744 No alias actin-cytoskeleton contact protein (NET3) of... 0.03 OrthoFinder output from all 47 species
Ehy_g01202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0442.g027390 No alias not classified & original description: CDS=1-717 0.03 OrthoFinder output from all 47 species
Smo415372 No alias Protein NETWORKED 4B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g077680.3.1 Solyc08g077680 actin-binding protein (NET4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011684 NAB 39 112
No external refs found!