1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g19015

Nbi_g19015


Description : not classified & original description: none


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19015
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00109510 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.07 OrthoFinder output from all 47 species
AT5G08650 No alias Small GTP-binding protein 0.12 OrthoFinder output from all 47 species
Adi_g116309 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g19322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02197 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04580 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Aspi01Gene43914.t1 Aspi01Gene43914 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0072.g036902 No alias not classified & original description: CDS=1-1971 0.07 OrthoFinder output from all 47 species
Cba_g17085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G059400.1 Ceric.02G059400 not classified & original description: pacid=50584081... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000912.22 No alias Translation factor GUF1 homolog, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre03.g165000 No alias Translation factor GUF1 homolog, chloroplastic... 0.06 OrthoFinder output from all 47 species
Dac_g07140 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g11300 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g10737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022409001 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.11 OrthoFinder output from all 47 species
LOC_Os02g06300.1 LOC_Os02g06300 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.11 OrthoFinder output from all 47 species
Len_g04338 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03115 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp7g18810.1 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis... 0.05 OrthoFinder output from all 47 species
Msp_g11300 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g10787 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g09463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18021 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g10075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo407721 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.04 OrthoFinder output from all 47 species
Solyc04g015450.3.1 Solyc04g015450 Translation factor GUF1 homolog, chloroplastic... 0.13 OrthoFinder output from all 47 species
Spa_g04229 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g01086 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e025200_P002 Zm00001e025200 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 357 427
IPR000795 T_Tr_GTP-bd_dom 155 333
IPR013842 LepA_CTD 640 746
IPR000640 EFG_V-like 551 637
No external refs found!