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  5. Nbi_g18718

Nbi_g18718


Description : not classified & original description: none


Gene families : OG0008376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18718
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT3G63430 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Adi_g024641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059403 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g25879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05253 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene16300.t1 Aspi01Gene16300 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010780 No alias not classified & original description: CDS=1-3840 0.02 OrthoFinder output from all 47 species
Cba_g03406 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.29G051300.1 Ceric.29G051300 not classified & original description: pacid=50624992... 0.06 OrthoFinder output from all 47 species
Dcu_g12861 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01003137001 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g07810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36943 LNG1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g13541 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017468 No alias not classified & original description: CDS=1410-4154 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0179.g024743 No alias not classified & original description: CDS=683-1084 0.03 OrthoFinder output from all 47 species
Solyc07g008670.3.1 Solyc07g008670 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g30649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 1245 1463
No external refs found!